Wikipedia

ベギアトア科

ベギアトア科（ベギアトアか、Beggiatoaceae）は真正細菌Pseudomonadota門ガンマプロテオバクテリア綱ベギアトア目の科の一つである。

ベギアトア科
イタリアにある「Grotta sulfurea」という水中洞窟で撮影されたベギアトア菌様糸状体。大部分はベギアトア属、チオスリックス属、フレキシバクター属菌体に似た糸状体で構成されている。
分類
ドメイン : 真正細菌
Bacteria
門 : Pseudomonadota門
綱 : ガンマプロテオバクテリア綱
Gammaproteobacteria
目 : ベギアトア目
Beggiatoales
科 : ベギアトア科
Beggiatoaceae
学名
Beggiatoaceae
Migula 1894[1]
(IJSEMリストに記載 1980)[2]
タイプ属
ベギアトア属
Beggiatoa
Trevisan 1842[3]
(IJSEMリストに掲載 1980)[2]
シノニム
  • チオシホン科
    "Thiosiphonaceae"
    Klas 1936[4]
下位分類（属）

本文を参照

下位分類（属）

編集

以下の属を含む(2024年9月現在)[5]。

IJSEMに正式承認されている属

編集
Trevisan 1842[3] (IJSEMリストに掲載 1980)[2]
Gureeva et al. 2019[6] (IJSEMリストに掲載 2019)[7]
Schulz et al. 1999[8] (IJSEMリストに掲載 1999)[9]
Lauterborn 1907[10] (IJSEMリストに掲載 1980)[2]

Candidatus

編集
  • "Candidatus Albibeggiatoa"　
Ravin et al. 2024[11]
  • "Candidatus Allobeggiatoa"　
Hinck et al. 2011[12] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Halobeggiatoa"　
Grünke et al. 2012[14] (IJSEMリストに掲載 2022)[15]
  • "Candidatus Isobeggiatoa"　
Salman et al. 2011[16] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Maribeggiatoa"　
Salman et al. 2011[16] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Marithioploca"　
Salman et al. 2011[16] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Marithrix"
Salman et al. 2011[16] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Parabeggiatoa"　
Salman et al. 2011[16] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Thiolava"　
Danovaro et al. 2017[17] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Thiophysa"　
Salman et al. 2011[16] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Thiopilula"　
Salman et al. 2011[16] (IJSEMリストに掲載 2020)[13]
  • "Candidatus Venteria"　
Fonseca et al. 2017[18] (IJSEMリストに掲載 2020)[13]

IJSEMに未承認の属

編集
  • "Conidiothrix"　
Benecke ex Petersen 1921[19]
  • "Thionema"　
Kolkwitz 1938[20]
  • "Thiosiphon"　チオシホン属
Klas 1936[4]
  • "Thiospirillopsis"　チオスピリロプシス属
Uphof 1927[21]
  • "Thioflexothrix"　
Orlova et al. 2015[22]
Thioflexithrix（チオフレキシスリックス属）のシノニム。

脚注

編集
[脚注の使い方]
  1. ^ Migula N (1894). “Ueber ein neues System der Bakterien”. Arbeiten aus dem Bakteriologischen Institut der Technischen Hochschule zu Karlsruhe 1: 235-238. 
  2. ^ a b c d V. B. D. Skerman, Vicki McGowan and P. H. A. Sneath (1: Department of Microbiology, University of Queensland, St. Lucia, Queensland 4067, Australia, 2: MRC Microbial Systematics Unit, University of Leicester, Leicester LE1 England 7RH) (01 January 1980). “Approved Lists of Bacterial Names”. International Journal of Systematic and Evolutionary Microbiology 30 (1): 225-420. doi:10.1099/00207713-30-1-225. 
  3. ^ a b Trevisan V (1842). Prospetto della Flora Euganea. Coi Tipi Del Seminario, パドヴァ 
  4. ^ a b Klas Z (1936). “Thiosiphon, eine neue Gattung der Schwefelbakterien”. Akad. Wiss. Wien Sitzungsb. mat.-nat. Kl., Abt. 1 145: 209-216. 
  5. ^ Jean P. Euzéby, Aidan C. Parte. “Family Beggiatoaceae”. List of Prokaryotic names with Standing in Nomenclature. 2024年9月20日閲覧。
  6. ^ M. V. Gureeva1, E. V. Belousova1, G. A. Dubinina2, A. A. Novikov3, D. S. Kopitsyn3 and M. Y. Grabovich1 (1: Department of Biochemistry and Cell Physiology, Voronezh State University, Universitetskaya pl., 1, Voronezh 394018, Russia. 2: Federal State Institution 'Federal Research Centre "Fundamentals of Biotechnology" of the Russian Academy of Sciences', Prospect 60-letiya Oktyabrya, 7/2, 117312 Moscow, Russia. 3: Gubkin University, 65/1 Leninsky Prospekt, Moscow 119991, Russia) (18 January 2019). “Thioflexithrix psekupsensis gen. nov., sp. nov., a filamentous gliding sulfur bacterium from the family Beggiatoaceae”. International Journal of Systematic and Evolutionary Microbiology 69 (3): 798-804. doi:10.1099/ijsem.0.003240. PMID 30657444. 
  7. ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology and Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (03 June 2019). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 69, part 3 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 69 (6): 1529-1530. doi:10.1099/ijsem.0.003349. 
  8. ^ H N Schulz 1, T Brinkhoff, T G Ferdelman, M H Mariné, A Teske, B B Jorgensen (1: Max Planck Institute for Marine Microbiology, Celsiusstrasse, D-28359 Bremen, Germany.) (16 Apr 1999). “Dense populations of a giant sulfur bacterium in Namibian shelf sediments”. Science 284 (5413): 493-495. doi:10.1126/science.284.5413.493. PMID 10205058. 
  9. ^ “Validation of publication of new names and new combinations previously effectively published outside the IJSB”. International Journal of Systematic and Evolutionary Microbiology 49 (4): 1325-1326. (01 October 1999). doi:10.1099/00207713-49-4-1325. 
  10. ^ “35. Robert Lauterborn: Eine neue Gattung der Schwefel-bakterien (Thioploca Schmidlei nov. gen. nov. spec”. Berichte der Deutschen Botanischen Gesellschaft 25 (5): 238-242. (June 1907). doi:10.1111/j.1438-8677.1907.tb06615.x. 
  11. ^ Nikolai V Ravin 1, Tatyana S Rudenko 2, Alexey V Beletsky 1, Dmitry D Smolyakov 2, Andrey V Mardanov 1, Margarita Yu Grabovich 2, Maria S Muntyan 3 (1: Institute of Bioengineering, Research Center of Biotechnology, Russian Academy of Sciences, Leninsky Prospect, 33-2, 119071 Moscow, Russia. 2: Department of Biochemistry and Cell Physiology, Voronezh State University, Universitetskaya pl., 1, 394018 Voronezh, Russia. 3: Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Leninskie Gory, 119991 Moscow, Russia.) (30 April 2024). “Phylogeny and Metabolic Potential of New Giant Sulfur Bacteria of the Family Beggiatoaceae from Coastal-Marine Sulfur Mats of the White Sea”. International Journal of Molecular Sciences 25 (11): 6028. doi:10.3390/ijms25116028. PMC 11172852. PMID 38892213. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11172852/. 
  12. ^ Susanne Hinck 1, Marc Mussmann, Verena Salman, Thomas R Neu, Sabine Lenk, Dirk de Beer, Henk M Jonkers (1: Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, D-28359 Bremen, Germany) (08 June 2011). “Vacuolated Beggiatoa-like filaments from different hypersaline environments form a novel genus”. Environmental Microbiology 13 (12): 3194-3205. doi:10.1111/j.1462-2920.2011.02513.x. PMID 21651683. 
  13. ^ a b c d e f g h i j Aharon Oren1, George M. Garrity2,3, Charles T. Parker3, Maria Chuvochina4 and Martha E. Trujillo5 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA. 3: NamesforLife, LLC, PO Box 769, Okemos MI 48805-0769, USA. 4: Australian Centre for Ecogenomics, University of Queensland, St. Lucia QLD 4072, Brisbane, Australia 5Departamento de Microbiología y Genética, Campus Miguel de Unamuno, Universidad de Salamanca, 37007, Salamanca, Spain.) (30 June 2020). “Lists of names of prokaryotic Candidatus taxa”. International Journal of Systematic and Evolutionary Microbiology 70 (7): 3956-4042. doi:10.1099/ijsem.0.003789. 
  14. ^ S. Grünke, A. Lichtschlag, D. de Beer, J. Felden, V. Salman, A. Ramette, H. N. Schulz-Vogt, and A. Boetius (06 Aug 2012). “Mats of psychrophilic thiotrophic bacteria associated with cold seeps of the Barents Sea”. Biogeosciences 9 (8): 2947–2960. doi:10.5194/bg-9-2947-2012. 
  15. ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (31 January 2022). “CANDIDATUS LIST No. 3. Lists of names of prokaryotic Candidatus taxa”. International Journal of Systematic and Evolutionary Microbiology 72 (1): 5186. doi:10.1099/ijsem.0.005186. 
  16. ^ a b c d e f g Verena Salman 1, Rudolf Amann, Anne-Christin Girnth, Lubos Polerecky, Jake V Bailey, Signe Høgslund, Gerdhard Jessen, Silvio Pantoja, Heide N Schulz-Vogt (1: Max Planck Institute for Marine Microbiology, Bremen, Germany) (June 2011). “A single-cell sequencing approach to the classification of large, vacuolated sulfur bacteria”. Systematic and Applied Microbiology 34 (4): 243-259. doi:10.1016/j.syapm.2011.02.001. PMID 21498017. 
  17. ^ Roberto Danovaro 1 2, Miquel Canals 3, Michael Tangherlini 1, Antonio Dell'Anno 1, Cristina Gambi 1, Galderic Lastras 3, David Amblas 3 4, Anna Sanchez-Vidal 3, Jaime Frigola 3, Antoni M Calafat 3, Rut Pedrosa-Pàmies 3, Jesus Rivera 5, Xavier Rayo 3, Cinzia Corinaldesi 6 (1: Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona 60131, Italy. 2: Stazione Zoologica Anton Dohrn, Naples, Naples 80121, Italy. 3: CRG Marine Geosciences, Department of Earth and Ocean Dynamics, Faculty of Earth Sciences, University of Barcelona, Barcelona E-08028, Spain. 4: Scott Polar Research Institute, Lensfield Road, Cambridge, UK. 5: Instituto Español de Oceanografía, Corazón de María 8, Madrid E-28002, Spain. 6: Dipartimento di Scienze e Ingegneria della Materia, dell'Ambiente ed Urbanistica, Polytechnic University of Marche, Ancona 60131, Italy.) (24 April 2017). “A submarine volcanic eruption leads to a novel microbial habitat”. Nature Ecology & Evolution 1 (6): 144. doi:10.1038/s41559-017-0144. PMID 28812643. 
  18. ^ Alexis Fonseca 1 2, Thomas Ishoey 3, Carola Espinoza 2 4, Danilo Pérez-Pantoja 5, Antonio Manghisi 6, Marina Morabito 6, Alexis Salas-Burgos 1, Víctor A Gallardo 2 4 (1: Department of Pharmacology, University of Concepcion, Concepcion, Chile. 2: Department of Oceanography, University of Concepcion, Concepcion, Chile. 3: Independent consultant, Encinitas, California, United States of America. 4: College of Ocean Science and Resources, Institute Marine Affairs and Resource Management, National Taiwan Ocean University, Keelung, Taiwan. 5: Programa Institucional de Fomento a la Investigación, Desarrollo e Innovación, Universidad Tecnológica Metropolitana, San Joaquin, Santiago, Chile. 6: Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of Messina, Messina, Italy.) (2017 Dec 13). “Genomic features of "Candidatus Venteria ishoeyi", a new sulfur-oxidizing macrobacterium from the Humboldt Sulfuretum off Chile”. PLoS One 12 (12): e0188371. doi:10.1371/journal.pone.0188371. PMC 5728499. PMID 29236755. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5728499/. 
  19. ^ Petersen EJ (1921). “A New Sapropelic Microorganism, Conidiothrix sulphurea”. Dansk Botanisk Arkiv 4: 1-16. 
  20. ^ Kolkwitz R (1938). “Thionema vaginatum, eine neue Schwefelbakterie”. Berichte der Deutschen Botanischen Gesellschaft 56: 11-15. 
  21. ^ Uphof JCT (1927). “Zur Oekologie der Schwefelbakterien in den Schwefelquellen Mittelfloridas”. Archiv für Hydrobiologie 18: 71-84. 
  22. ^ Orlova MV, Fedonenko JP, Yevstigneyeva SS, Belousova EV, Grabovich MY (2015). “Gas chromatographic study of exopolysaccharides composition and their role in the protection against oxidative stress in microaerophilic bacterium Thioflexothrix psekupsii D3 gen. nov. sp. nov.”. In Unknown. Adsorption and chromatographic process. 15. Voronezh State University, 露ヴォロネジ. pp. 578-585 
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